STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc32Uncharacterized protein C15orf57 homolog. (179 aa)    
Predicted Functional Partners:
Mrps22
28S ribosomal protein S22, mitochondrial.
   
 0.850
Mrps18b
28S ribosomal protein S18b, mitochondrial isoform X1.
   
 0.847
Mrps33
28S ribosomal protein S33, mitochondrial isoform X1.
   
 0.847
Mrps16
28S ribosomal protein S16, mitochondrial.
   
 0.840
Dap3
28S ribosomal protein S29, mitochondrial isoform X1.
   
 0.836
Mrps17
28S ribosomal protein S17, mitochondrial.
   
  0.813
Mrps31
28S ribosomal protein S31, mitochondrial.
   
  0.810
Mrps9
28S ribosomal protein S9, mitochondrial.
    
 0.799
Mrps6
28S ribosomal protein S6, mitochondrial.
    
  0.793
Mrps27
28S ribosomal protein S27, mitochondrial.
    
 0.791
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.