STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pced1aPC-esterase domain-containing protein 1A isoform X1. (449 aa)    
Predicted Functional Partners:
Slx4ip
Protein SLX4IP isoform X1.
      
 0.724
F830045P16Rik
Signal-regulatory protein beta-1-like.
      
 0.640
Esf1
ESF1 homolog.
      
 0.574
Rrbp1
Ribosome-binding protein 1.
      
 0.512
Atrn
Attractin.
      
 0.504
Commd7
COMM domain-containing protein 7.
      
 0.461
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.