STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Foxa2Forkhead box protein A2, hepatocyte nuclear factor 3-beta. (465 aa)    
Predicted Functional Partners:
Rps6kb2
Ribosomal protein S6 kinase beta-2.
     
 0.905
Rps6kb1
Ribosomal protein S6 kinase beta-1 isoform X1.
     
 0.905
Ar
Androgen receptor.
    
 0.821
Shh
Sonic hedgehog protein isoform X1.
     
 0.808
Pdx1
Pancreas/duodenum homeobox protein 1.
    
 0.785
Gata4
Transcription factor GATA-4 isoform X1.
   
 0.775
Esr1
Estrogen receptor isoform X1.
    
 0.767
Pou5f1
POU domain, class 5, transcription factor 1 isoform X1.
     
 0.755
Gata6
Transcription factor GATA-6.
   
 0.754
Hif1a
Hypoxia-inducible factor 1-alpha isoform X1.
    
 
 0.750
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.