STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cst8Cystatin-8. (142 aa)    
Predicted Functional Partners:
Cstdc2
Cystatin-9-like.
   
  
 0.620
Cst12
Cystatin-12.
   
  
 0.615
Lcn8
Epididymal-specific lipocalin-8.
   
  
 0.514
Ttc29
Tetratricopeptide repeat protein 29.
   
 
 0.481
Gzf1
GDNF-inducible zinc finger protein 1.
    
 
 0.419
Cstdc1
Cystatin-14.
      
 0.400
Defb47
Beta-defensin 130-like.
      
 0.400
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.