Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cav3 | Dag1 | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0025582 | Caveolin 3. | Dystroglycan 1. | 0.918 |
Cav3 | Dmd | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0089682 | Caveolin 3. | Dystrophin isoform X1. | 0.942 |
Cav3 | Dtna | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0038763 | Caveolin 3. | Dystrobrevin alpha. | 0.655 |
Cav3 | Nos1 | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0058498 | Caveolin 3. | Nitric oxide synthase, brain. | 0.705 |
Cav3 | Sgca | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0036031 | Caveolin 3. | Alpha-sarcoglycan. | 0.907 |
Cav3 | Sgcd | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0033090 | Caveolin 3. | Delta-sarcoglycan. | 0.884 |
Cav3 | Sgcg | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0085158 | Caveolin 3. | Gamma-sarcoglycan. | 0.881 |
Cav3 | Snta1 | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0066370 | Caveolin 3. | Alpha-1-syntrophin isoform X1. | 0.789 |
Cav3 | Sspn | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0053186 | Caveolin 3. | Sarcospan. | 0.860 |
Dag1 | Cav3 | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0051511 | Dystroglycan 1. | Caveolin 3. | 0.918 |
Dag1 | Dmd | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0089682 | Dystroglycan 1. | Dystrophin isoform X1. | 0.999 |
Dag1 | Dtna | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0038763 | Dystroglycan 1. | Dystrobrevin alpha. | 0.957 |
Dag1 | Nos1 | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0058498 | Dystroglycan 1. | Nitric oxide synthase, brain. | 0.559 |
Dag1 | Sgca | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0036031 | Dystroglycan 1. | Alpha-sarcoglycan. | 0.974 |
Dag1 | Sgcd | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0033090 | Dystroglycan 1. | Delta-sarcoglycan. | 0.978 |
Dag1 | Sgcg | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0085158 | Dystroglycan 1. | Gamma-sarcoglycan. | 0.964 |
Dag1 | Snta1 | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0066370 | Dystroglycan 1. | Alpha-1-syntrophin isoform X1. | 0.917 |
Dag1 | Sspn | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0053186 | Dystroglycan 1. | Sarcospan. | 0.925 |
Dmd | Cav3 | MGP_PahariEiJ_P0089682 | MGP_PahariEiJ_P0051511 | Dystrophin isoform X1. | Caveolin 3. | 0.942 |
Dmd | Dag1 | MGP_PahariEiJ_P0089682 | MGP_PahariEiJ_P0025582 | Dystrophin isoform X1. | Dystroglycan 1. | 0.999 |
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