Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H2-Eb1 | Snhg11 | MGP_PahariEiJ_P0043738 | MGP_PahariEiJ_P0066813 | H-2 class II histocompatibility antigen, I-E beta chain. | Small nucleolar RNA host gene 11. | 0.420 |
Prelid2 | Smim5 | MGP_PahariEiJ_P0039199 | MGP_PahariEiJ_P0037759 | PRELI domain-containing protein 2 isoform X1. | Small integral membrane protein 5. | 0.476 |
Prelid2 | Snhg11 | MGP_PahariEiJ_P0039199 | MGP_PahariEiJ_P0066813 | PRELI domain-containing protein 2 isoform X1. | Small nucleolar RNA host gene 11. | 0.504 |
Smim5 | Prelid2 | MGP_PahariEiJ_P0037759 | MGP_PahariEiJ_P0039199 | Small integral membrane protein 5. | PRELI domain-containing protein 2 isoform X1. | 0.476 |
Smim5 | Snhg11 | MGP_PahariEiJ_P0037759 | MGP_PahariEiJ_P0066813 | Small integral membrane protein 5. | Small nucleolar RNA host gene 11. | 0.495 |
Snhg11 | H2-Eb1 | MGP_PahariEiJ_P0066813 | MGP_PahariEiJ_P0043738 | Small nucleolar RNA host gene 11. | H-2 class II histocompatibility antigen, I-E beta chain. | 0.420 |
Snhg11 | Prelid2 | MGP_PahariEiJ_P0066813 | MGP_PahariEiJ_P0039199 | Small nucleolar RNA host gene 11. | PRELI domain-containing protein 2 isoform X1. | 0.504 |
Snhg11 | Smim5 | MGP_PahariEiJ_P0066813 | MGP_PahariEiJ_P0037759 | Small nucleolar RNA host gene 11. | Small integral membrane protein 5. | 0.495 |
Snhg11 | Tmem184b | MGP_PahariEiJ_P0066813 | MGP_PahariEiJ_P0042305 | Small nucleolar RNA host gene 11. | Transmembrane protein 184B isoform X1. | 0.416 |
Tmem184b | Snhg11 | MGP_PahariEiJ_P0042305 | MGP_PahariEiJ_P0066813 | Transmembrane protein 184B isoform X1. | Small nucleolar RNA host gene 11. | 0.416 |