STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tox2TOX high mobility group box family member 2 isoform X1. (522 aa)    
Predicted Functional Partners:
Actr8
Actin-related protein 8.
    
 0.567
Polrmt
DNA-directed RNA polymerase, mitochondrial isoform X1.
    
 0.551
Gtf2h1
General transcription factor IIH subunit 1 isoform X1.
    
 0.547
Ercc3
TFIIH basal transcription factor complex helicase XPB subunit.
   
 0.544
Actr5
Actin-related protein 5.
    
 0.542
Gtf2h2
Transcription initiation factor TFIIH subunit 2.
   
 0.536
Ruvbl1
RuvB-like protein 1 (pontin 52).
    
 0.533
Gtf2h3
Transcription initiation factor TFIIH subunit 3.
    
 0.533
Polr1e
DNA-directed RNA polymerase I subunit RPA49 isoform X1.
    
 0.514
Ercc2
TFIIH basal transcription factor complex helicase XPD subunit.
    
 0.506
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.