STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_PahariEiJ_P0067212annotation not available (526 aa)    
Predicted Functional Partners:
Ints5
Integrator complex subunit 5.
    
   0.908
Ints1
Integrator complex subunit 1.
    
   0.908
Ints3
Integrator complex subunit 3.
    
   0.908
Ints6
Integrator complex subunit 6 isoform X1.
    
   0.908
Zfp592
Zinc finger protein 592.
    
 
 0.735
Dbn1
Drebrin isoform X1.
    
   0.714
Zfp687
Zinc finger protein 687.
    
 
 0.676
Chd4
Chromodomain-helicase-DNA-binding protein 4.
    
 
0.641
Dbnl
Drebrin-like protein isoform X1.
    
   0.556
Gatad2a
Transcriptional repressor p66-alpha isoform X1.
   
 
 0.542
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.