STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_PahariEiJ_P0068287annotation not available (390 aa)    
Predicted Functional Partners:
Pnisr
Arginine/serine-rich protein PNISR isoform X1.
   
   0.679
Rsrc2
Arginine/serine-rich coiled-coil protein 2 isoform X1.
   
 0.608
Zmynd19
Zinc finger MYND domain-containing protein 19.
    
 
 0.571
Yipf1
Protein YIPF1 isoform X1.
    
 0.569
Dzip1l
Zinc finger protein DZIP1L.
    
 0.557
Tbc1d31
TBC1 domain family member 31 isoform X1.
    
 0.547
Zfc3h1
LOW QUALITY PROTEIN: zinc finger C3H1 domain-containing protein.
   
   0.534
Magee1
Melanoma-associated antigen E1.
   
 0.518
Ccdc28a
Coiled-coil domain-containing protein 28A.
      
 0.505
Tmem140
Transmembrane protein 140.
      
 0.504
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.