STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Eps8l3Epidermal growth factor receptor kinase substrate 8-like protein 3. (600 aa)    
Predicted Functional Partners:
Snrpe
Small nuclear ribonucleoprotein E.
      
 0.722
Cask
Calcium/calmodulin-dependent serine protein kinase.
    
 0.690
Dsg4
Desmoglein 4.
      
 0.681
Lpar6
Lysophosphatidic acid receptor 6.
   
  
 0.668
Apcdd1
Protein APCDD1.
      
 0.645
Cdsn
Corneodesmosin isoform X1.
   
  
 0.641
Espn
Espin isoform X1.
     
 0.504
Myo3a
Myosin-IIIa.
   
 0.497
Myo3b
Myosin-IIIb.
   
 0.497
Hephl1
Hephaestin-like protein 1.
   
  
 0.458
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.