Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
5730480H06Rik | Cnn3 | MGP_PahariEiJ_P0031319 | MGP_PahariEiJ_P0071167 | PACRG-like protein isoform X1. | Calponin-3 isoform X1. | 0.471 |
5730480H06Rik | Efhb | MGP_PahariEiJ_P0031319 | MGP_PahariEiJ_P0044766 | PACRG-like protein isoform X1. | EF-hand domain-containing family member B. | 0.705 |
5730480H06Rik | Efhc1 | MGP_PahariEiJ_P0031319 | MGP_PahariEiJ_P0072238 | PACRG-like protein isoform X1. | EF-hand domain-containing protein 1 isoform X1. | 0.708 |
5730480H06Rik | Tubal3 | MGP_PahariEiJ_P0031319 | MGP_PahariEiJ_P0040181 | PACRG-like protein isoform X1. | Tubulin alpha chain-like 3. | 0.411 |
5730480H06Rik | Wdr90 | MGP_PahariEiJ_P0031319 | MGP_PahariEiJ_P0055666 | PACRG-like protein isoform X1. | WD repeat-containing protein 90 isoform X1. | 0.877 |
Bcl2l10 | Cnn3 | MGP_PahariEiJ_P0024352 | MGP_PahariEiJ_P0071167 | Bcl-2-like protein 10. | Calponin-3 isoform X1. | 0.507 |
Calb2 | Cnn3 | MGP_PahariEiJ_P0054254 | MGP_PahariEiJ_P0071167 | Calretinin. | Calponin-3 isoform X1. | 0.534 |
Calb2 | Wdr90 | MGP_PahariEiJ_P0054254 | MGP_PahariEiJ_P0055666 | Calretinin. | WD repeat-containing protein 90 isoform X1. | 0.544 |
Calml4 | Cnn3 | MGP_PahariEiJ_P0023900 | MGP_PahariEiJ_P0071167 | Calmodulin-like protein 4 isoform X1. | Calponin-3 isoform X1. | 0.491 |
Calml4 | Wdr90 | MGP_PahariEiJ_P0023900 | MGP_PahariEiJ_P0055666 | Calmodulin-like protein 4 isoform X1. | WD repeat-containing protein 90 isoform X1. | 0.544 |
Cnn3 | 5730480H06Rik | MGP_PahariEiJ_P0071167 | MGP_PahariEiJ_P0031319 | Calponin-3 isoform X1. | PACRG-like protein isoform X1. | 0.471 |
Cnn3 | Bcl2l10 | MGP_PahariEiJ_P0071167 | MGP_PahariEiJ_P0024352 | Calponin-3 isoform X1. | Bcl-2-like protein 10. | 0.507 |
Cnn3 | Calb2 | MGP_PahariEiJ_P0071167 | MGP_PahariEiJ_P0054254 | Calponin-3 isoform X1. | Calretinin. | 0.534 |
Cnn3 | Calml4 | MGP_PahariEiJ_P0071167 | MGP_PahariEiJ_P0023900 | Calponin-3 isoform X1. | Calmodulin-like protein 4 isoform X1. | 0.491 |
Cnn3 | Efhb | MGP_PahariEiJ_P0071167 | MGP_PahariEiJ_P0044766 | Calponin-3 isoform X1. | EF-hand domain-containing family member B. | 0.526 |
Cnn3 | Efhc1 | MGP_PahariEiJ_P0071167 | MGP_PahariEiJ_P0072238 | Calponin-3 isoform X1. | EF-hand domain-containing protein 1 isoform X1. | 0.463 |
Cnn3 | Pacrg | MGP_PahariEiJ_P0071167 | MGP_PahariEiJ_P0054984 | Calponin-3 isoform X1. | Parkin coregulated gene protein. | 0.471 |
Cnn3 | Tubal3 | MGP_PahariEiJ_P0071167 | MGP_PahariEiJ_P0040181 | Calponin-3 isoform X1. | Tubulin alpha chain-like 3. | 0.469 |
Cnn3 | Wdr1 | MGP_PahariEiJ_P0071167 | MGP_PahariEiJ_P0031166 | Calponin-3 isoform X1. | WD repeat-containing protein 1 isoform X1. | 0.495 |
Cnn3 | Wdr90 | MGP_PahariEiJ_P0071167 | MGP_PahariEiJ_P0055666 | Calponin-3 isoform X1. | WD repeat-containing protein 90 isoform X1. | 0.730 |
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