STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdhaf4Succinate dehydrogenase assembly factor 4, mitochondrial. (104 aa)    
Predicted Functional Partners:
Sdha
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial isoform X1.
   
 
 0.732
Tac1
Protachykinin-1 isoform X1.
   
 
 0.709
Sdhaf1
Succinate dehydrogenase assembly factor 1, mitochondrial.
      
 0.661
Sdhaf2
Succinate dehydrogenase assembly factor 2, mitochondrial.
      
 0.655
Coa4
Cytochrome c oxidase assembly factor 4 homolog, mitochondrial.
      
 0.485
Lyrm7
Complex III assembly factor LYRM7.
      
 0.422
Sdhc
Succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X1.
   
  
 0.416
Fbxo17
F-box only protein 17.
      
 0.400
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.