STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpp4MAGUK p55 subfamily member 4 isoform X1. (635 aa)    
Predicted Functional Partners:
Mpp5
MAGUK p55 subfamily member 5.
   
 
0.913
Rims2
Regulating synaptic membrane exocytosis 2.
   
 
 0.539
Aprt
Adenine phosphoribosyltransferase.
  
 
 0.519
Apba2
Amyloid beta A4 precursor protein-binding family A member 2.
    
 0.500
Apba1
Amyloid beta A4 precursor protein-binding family A member 1.
    
 0.500
Apba3
Amyloid beta A4 precursor protein-binding family A member 3.
    
 0.500
Lin7b
Protein lin-7 homolog B isoform X1.
    
0.494
Lin7c
Protein lin-7 homolog C isoform X1.
    
0.494
Lin7a
Protein lin-7 homolog A.
    
0.494
Polr2f
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
  
  
 0.477
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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