STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fastkd2FAST kinase domain-containing protein 2, mitochondrial. (687 aa)    
Predicted Functional Partners:
Ngrn
Neugrin.
    
 
 0.861
Trub2
Probable tRNA pseudouridine synthase 2 isoform X1.
   
 
 0.783
Mterf3
Transcription termination factor 3, mitochondrial.
   
 
 0.777
Ptcd1
Pentatricopeptide repeat-containing protein 1, mitochondrial.
    
 
 0.776
Rpusd4
RNA pseudouridylate synthase domain-containing protein 4 isoform X1.
   
 
 0.769
Ddx28
Probable ATP-dependent RNA helicase DDX28.
   
 
 0.740
Grsf1
G-rich sequence factor 1 isoform X1.
    
 
 0.664
Fastkd1
FAST kinase domain-containing protein 1, mitochondrial.
      
 0.641
Fastk
Fas-activated serine/threonine kinase isoform X1.
      
 0.636
Rcc1l
RCC1-like G exchanging factor-like protein.
    
 
 0.633
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.