STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plekhm3Pleckstrin homology domain-containing family M member 3. (760 aa)    
Predicted Functional Partners:
Jmjd4
JmjC domain-containing protein 4 isoform X1.
      
 0.505
Ccnyl1
Cyclin-Y-like protein 1 isoform X1.
      
 0.505
Mettl21a
Protein N-lysine methyltransferase METTL21A.
      
 0.504
Tmem260
Transmembrane protein 260 isoform X1.
      
 0.504
Tsga10
Testis-specific gene 10 protein isoform X1.
    
 
 0.502
Pikfyve
1-phosphatidylinositol 3-phosphate 5-kinase isoform X1.
      
 0.465
MGP_PahariEiJ_P0034708
annotation not available
   
  
 0.405
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.