STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trpm8Transient receptor potential cation channel subfamily M member 8. (1104 aa)    
Predicted Functional Partners:
Ppp1ca
Serine/threonine-protein phosphatase PP1-alpha catalytic subunit isoform X1.
    
  0.912
Ppp1cc
Serine/threonine-protein phosphatase PP1-gamma catalytic subunit.
    
  0.912
Ppp1cb
Serine/threonine-protein phosphatase PP1-beta catalytic subunit.
    
  0.912
Trpv1
Transient receptor potential cation channel subfamily V member 1 isoform X1.
   
 
 0.785
Trpa1
Transient receptor potential cation channel subfamily A member 1 isoform X1.
     
 0.784
Trpv3
Transient receptor potential cation channel subfamily V member 3.
   
 
 0.769
Trpv4
Transient receptor potential cation channel subfamily V member 4 isoform X1.
   
 
 0.768
Scn10a
Sodium channel protein type 10 subunit alpha isoform X1.
     
 0.747
Gpr55
G protein-coupled receptor 55.
      
 0.732
Scn11a
Sodium channel protein type 11 subunit alpha.
     
 0.719
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.