STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Map3k19Mitogen-activated protein kinase kinase kinase 19. (1195 aa)    
Predicted Functional Partners:
Map2k4
Dual specificity mitogen-activated protein kinase kinase 4 isoform X1.
   
0.671
Srf
Serum response factor.
    
 0.652
Traf6
TNF receptor-associated factor 6.
   
 0.640
Map2k5
Dual specificity mitogen-activated protein kinase kinase 5 isoform X1.
   
0.613
Map2k1
Dual specificity mitogen-activated protein kinase kinase 1.
   
0.613
Map2k2
Dual specificity mitogen-activated protein kinase kinase 2 isoform X1.
   
0.613
Map2k7
Dual specificity mitogen-activated protein kinase kinase 7 isoform X1.
    
0.546
Mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.529
Sqstm1
Sequestosome-1 isoform X1.
    
 0.524
Nbr1
Next to BRCA1 gene 1 protein isoform X1.
    
 0.506
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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