STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cxcr4C-X-C chemokine receptor type 4. (359 aa)    
Predicted Functional Partners:
Cxcl12
Stromal cell-derived factor 1 isoform X1.
   
 0.999
Ackr3
C-X-C chemokine receptor type 7 (atypical chemokine receptor 3).
    
0.984
Arrb1
Beta-arrestin-1 isoform X1.
   
 0.977
Cxcl1
Growth-regulated alpha protein.
   
 
 0.965
Ccl5
C-C motif chemokine 5.
    
 0.964
Cxcl10
C-X-C motif chemokine 10.
    
 0.960
Gna12
Guanine nucleotide-binding protein subunit alpha-12 isoform X1.
    
 0.960
Cx3cl1
C-X3-C motif chemokine 1.
    
 0.958
Gnaq
Guanine nucleotide-binding protein G(q) subunit alpha.
   
 0.956
Cxcl9
C-X-C motif chemokine 9.
   
 0.949
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.