Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mef2a | Mef2c | MGP_PahariEiJ_P0016911 | MGP_PahariEiJ_P0026651 | Myocyte enhancer factor 2A. | Myocyte-specific enhancer factor 2C isoform X1. | 0.573 |
Mef2a | Mef2d | MGP_PahariEiJ_P0016911 | MGP_PahariEiJ_P0069319 | Myocyte enhancer factor 2A. | Myocyte-specific enhancer factor 2D isoform X1. | 0.777 |
Mef2a | Myf6 | MGP_PahariEiJ_P0016911 | MGP_PahariEiJ_P0087959 | Myocyte enhancer factor 2A. | Myogenic factor 6. | 0.664 |
Mef2a | Myog | MGP_PahariEiJ_P0016911 | MGP_PahariEiJ_P0075238 | Myocyte enhancer factor 2A. | Myogenic factor 4 (myogenin). | 0.738 |
Mef2a | Tcf12 | MGP_PahariEiJ_P0016911 | MGP_PahariEiJ_P0024204 | Myocyte enhancer factor 2A. | Transcription factor 12 isoform X1. | 0.423 |
Mef2a | Tcf3 | MGP_PahariEiJ_P0016911 | MGP_PahariEiJ_P0087104 | Myocyte enhancer factor 2A. | Transcription factor E2-alpha isoform X1. | 0.430 |
Mef2c | Mef2a | MGP_PahariEiJ_P0026651 | MGP_PahariEiJ_P0016911 | Myocyte-specific enhancer factor 2C isoform X1. | Myocyte enhancer factor 2A. | 0.573 |
Mef2c | Mef2d | MGP_PahariEiJ_P0026651 | MGP_PahariEiJ_P0069319 | Myocyte-specific enhancer factor 2C isoform X1. | Myocyte-specific enhancer factor 2D isoform X1. | 0.966 |
Mef2c | Myf6 | MGP_PahariEiJ_P0026651 | MGP_PahariEiJ_P0087959 | Myocyte-specific enhancer factor 2C isoform X1. | Myogenic factor 6. | 0.699 |
Mef2c | Myog | MGP_PahariEiJ_P0026651 | MGP_PahariEiJ_P0075238 | Myocyte-specific enhancer factor 2C isoform X1. | Myogenic factor 4 (myogenin). | 0.832 |
Mef2c | Pax7 | MGP_PahariEiJ_P0026651 | MGP_PahariEiJ_P0080567 | Myocyte-specific enhancer factor 2C isoform X1. | Paired box protein Pax-7 isoform X1. | 0.501 |
Mef2c | Tcf12 | MGP_PahariEiJ_P0026651 | MGP_PahariEiJ_P0024204 | Myocyte-specific enhancer factor 2C isoform X1. | Transcription factor 12 isoform X1. | 0.429 |
Mef2c | Tcf3 | MGP_PahariEiJ_P0026651 | MGP_PahariEiJ_P0087104 | Myocyte-specific enhancer factor 2C isoform X1. | Transcription factor E2-alpha isoform X1. | 0.443 |
Mef2d | Mef2a | MGP_PahariEiJ_P0069319 | MGP_PahariEiJ_P0016911 | Myocyte-specific enhancer factor 2D isoform X1. | Myocyte enhancer factor 2A. | 0.777 |
Mef2d | Mef2c | MGP_PahariEiJ_P0069319 | MGP_PahariEiJ_P0026651 | Myocyte-specific enhancer factor 2D isoform X1. | Myocyte-specific enhancer factor 2C isoform X1. | 0.966 |
Mef2d | Myf6 | MGP_PahariEiJ_P0069319 | MGP_PahariEiJ_P0087959 | Myocyte-specific enhancer factor 2D isoform X1. | Myogenic factor 6. | 0.672 |
Mef2d | Myog | MGP_PahariEiJ_P0069319 | MGP_PahariEiJ_P0075238 | Myocyte-specific enhancer factor 2D isoform X1. | Myogenic factor 4 (myogenin). | 0.819 |
Mef2d | Tcf12 | MGP_PahariEiJ_P0069319 | MGP_PahariEiJ_P0024204 | Myocyte-specific enhancer factor 2D isoform X1. | Transcription factor 12 isoform X1. | 0.573 |
Mef2d | Tcf3 | MGP_PahariEiJ_P0069319 | MGP_PahariEiJ_P0087104 | Myocyte-specific enhancer factor 2D isoform X1. | Transcription factor E2-alpha isoform X1. | 0.446 |
Myf6 | Mef2a | MGP_PahariEiJ_P0087959 | MGP_PahariEiJ_P0016911 | Myogenic factor 6. | Myocyte enhancer factor 2A. | 0.664 |
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