Rgs8 protein (Mus pahari) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Rgs8

Regulator of G-protein signaling 8 isoform X1. (180 aa)

Predicted Functional Partners:

Gnaq

0.989

Gnao1

0.865

Gnb5

0.834

Gnai2

0.820

Gnai1

0.746

Gna13

0.742

Gnat1

0.740

Gna12

0.684

Gna11

0.670

Rgs7bp

0.629

Your Current Organism:

Mus pahari

NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gna11	Gna12	MGP_PahariEiJ_P0087326	MGP_PahariEiJ_P0060106	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein subunit alpha-12 isoform X1.	0.491
Gna11	Gna13	MGP_PahariEiJ_P0087326	MGP_PahariEiJ_P0037415	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein subunit alpha-13 isoform X1.	0.704
Gna11	Gnaq	MGP_PahariEiJ_P0087326	MGP_PahariEiJ_P0021313	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein G(q) subunit alpha.	0.992
Gna11	Gnat1	MGP_PahariEiJ_P0087326	MGP_PahariEiJ_P0025425	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein G(t) subunit alpha 1/2.	0.850
Gna11	Gnb5	MGP_PahariEiJ_P0087326	MGP_PahariEiJ_P0024351	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein subunit beta-5.	0.736
Gna11	Rgs8	MGP_PahariEiJ_P0087326	MGP_PahariEiJ_P0075693	Guanine nucleotide-binding protein subunit alpha-11.	Regulator of G-protein signaling 8 isoform X1.	0.670
Gna12	Gna11	MGP_PahariEiJ_P0060106	MGP_PahariEiJ_P0087326	Guanine nucleotide-binding protein subunit alpha-12 isoform X1.	Guanine nucleotide-binding protein subunit alpha-11.	0.491
Gna12	Gna13	MGP_PahariEiJ_P0060106	MGP_PahariEiJ_P0037415	Guanine nucleotide-binding protein subunit alpha-12 isoform X1.	Guanine nucleotide-binding protein subunit alpha-13 isoform X1.	0.986
Gna12	Gnai1	MGP_PahariEiJ_P0060106	MGP_PahariEiJ_P0048195	Guanine nucleotide-binding protein subunit alpha-12 isoform X1.	Guanine nucleotide-binding protein G(i) subunit alpha-1 isoform X1.	0.446
Gna12	Gnai2	MGP_PahariEiJ_P0060106	MGP_PahariEiJ_P0025401	Guanine nucleotide-binding protein subunit alpha-12 isoform X1.	Guanine nucleotide-binding protein G(i) subunit alpha-2 isoform X1.	0.450
Gna12	Gnao1	MGP_PahariEiJ_P0060106	MGP_PahariEiJ_P0053801	Guanine nucleotide-binding protein subunit alpha-12 isoform X1.	Guanine nucleotide-binding protein G(o) subunit alpha isoform X1.	0.614
Gna12	Gnaq	MGP_PahariEiJ_P0060106	MGP_PahariEiJ_P0021313	Guanine nucleotide-binding protein subunit alpha-12 isoform X1.	Guanine nucleotide-binding protein G(q) subunit alpha.	0.539
Gna12	Gnat1	MGP_PahariEiJ_P0060106	MGP_PahariEiJ_P0025425	Guanine nucleotide-binding protein subunit alpha-12 isoform X1.	Guanine nucleotide-binding protein G(t) subunit alpha 1/2.	0.608
Gna12	Gnb5	MGP_PahariEiJ_P0060106	MGP_PahariEiJ_P0024351	Guanine nucleotide-binding protein subunit alpha-12 isoform X1.	Guanine nucleotide-binding protein subunit beta-5.	0.802
Gna12	Rgs8	MGP_PahariEiJ_P0060106	MGP_PahariEiJ_P0075693	Guanine nucleotide-binding protein subunit alpha-12 isoform X1.	Regulator of G-protein signaling 8 isoform X1.	0.684
Gna13	Gna11	MGP_PahariEiJ_P0037415	MGP_PahariEiJ_P0087326	Guanine nucleotide-binding protein subunit alpha-13 isoform X1.	Guanine nucleotide-binding protein subunit alpha-11.	0.704
Gna13	Gna12	MGP_PahariEiJ_P0037415	MGP_PahariEiJ_P0060106	Guanine nucleotide-binding protein subunit alpha-13 isoform X1.	Guanine nucleotide-binding protein subunit alpha-12 isoform X1.	0.986
Gna13	Gnai2	MGP_PahariEiJ_P0037415	MGP_PahariEiJ_P0025401	Guanine nucleotide-binding protein subunit alpha-13 isoform X1.	Guanine nucleotide-binding protein G(i) subunit alpha-2 isoform X1.	0.405
Gna13	Gnao1	MGP_PahariEiJ_P0037415	MGP_PahariEiJ_P0053801	Guanine nucleotide-binding protein subunit alpha-13 isoform X1.	Guanine nucleotide-binding protein G(o) subunit alpha isoform X1.	0.705
Gna13	Gnaq	MGP_PahariEiJ_P0037415	MGP_PahariEiJ_P0021313	Guanine nucleotide-binding protein subunit alpha-13 isoform X1.	Guanine nucleotide-binding protein G(q) subunit alpha.	0.846