STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc19a2Solute carrier family 19 (thiamine transporter), member 2/3. (498 aa)    
Predicted Functional Partners:
Slc19a3
Solute carrier family 19 (thiamine transporter), member 2/3.
  
  
 
0.903
Tpk1
Thiamin pyrophosphokinase 1 isoform X1.
 
    
 0.573
Ier3ip1
Immediate early response 3-interacting protein 1.
      
 0.503
Slc25a19
Solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19.
      
 0.481
Cgrrf1
Cell growth regulator with RING finger domain protein 1 isoform X1.
      
 0.416
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.