STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AladDelta-aminolevulinic acid dehydratase isoform X1. (330 aa)    
Predicted Functional Partners:
Hmbs
Porphobilinogen deaminase isoform X1.
 
 0.998
Alas1
5-aminolevulinate synthase, nonspecific, mitochondrial isoform X1.
    
 0.977
Alas2
5-aminolevulinate synthase, erythroid-specific, mitochondrial isoform X1.
    
 0.970
Uros
Uroporphyrinogen-III synthase isoform X1.
  
 0.960
Urod
Uroporphyrinogen decarboxylase.
 
 
 0.802
Ppox
Protoporphyrinogen/coproporphyrinogen III oxidase.
  
  
 0.752
Cpox
Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial.
  
  
 0.746
Fech
Protoporphyrin/coproporphyrin ferrochelatase.
  
  
 0.740
Oat
Ornithine aminotransferase, mitochondrial isoform X1.
  
 
 0.737
Eprs
Bifunctional glutamyl/prolyl-tRNA synthetase.
  
  
 0.609
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.