STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dmrta1Doublesex- and mab-3-related transcription factor 4/5. (490 aa)    
Predicted Functional Partners:
Kptn
KICSTOR complex protein kaptin.
    
 0.567
Szt2
KICSTOR complex protein SZT2.
    
 0.562
Depdc5
DEP domain-containing protein 5 isoform X1.
   
 0.526
Wdr59
WD repeat-containing protein 59.
    
 0.505
Wdr24
WD repeat-containing protein 24.
    
 0.499
Nprl2
Nitrogen permease regulator 2-like protein.
    
 0.486
Armc12
Armadillo repeat-containing protein 12.
      
 0.461
Dhrs7c
Dehydrogenase/reductase SDR family member 7C.
   
 
 0.403
Xrcc4
DNA repair protein XRCC4 isoform X1.
    
 0.402
Itfg2
Integrin-alpha FG-GAP repeat-containing protein 2.
    
 0.402
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.