Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Nus1 | Trabd2b | MGP_PahariEiJ_P0086048 | MGP_PahariEiJ_P0078756 | Dehydrodolichyl diphosphate synthase complex subunit NUS1. | Metalloprotease TIKI2. | 0.418 |
Shisa3 | Trabd2b | MGP_PahariEiJ_P0031653 | MGP_PahariEiJ_P0078756 | Protein shisa-3 homolog. | Metalloprotease TIKI2. | 0.476 |
Slc5a9 | Trabd2b | MGP_PahariEiJ_P0078734 | MGP_PahariEiJ_P0078756 | Solute carrier family 5 (sodium/glucose cotransporter), member 9. | Metalloprotease TIKI2. | 0.420 |
Trabd2b | Nus1 | MGP_PahariEiJ_P0078756 | MGP_PahariEiJ_P0086048 | Metalloprotease TIKI2. | Dehydrodolichyl diphosphate synthase complex subunit NUS1. | 0.418 |
Trabd2b | Shisa3 | MGP_PahariEiJ_P0078756 | MGP_PahariEiJ_P0031653 | Metalloprotease TIKI2. | Protein shisa-3 homolog. | 0.476 |
Trabd2b | Slc5a9 | MGP_PahariEiJ_P0078756 | MGP_PahariEiJ_P0078734 | Metalloprotease TIKI2. | Solute carrier family 5 (sodium/glucose cotransporter), member 9. | 0.420 |