STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Matn1Cartilage matrix protein. (499 aa)    
Predicted Functional Partners:
Acan
Aggrecan core protein isoform X1.
   
 0.682
Comp
Cartilage oligomeric matrix protein.
     
 0.583
Anxa10
Annexin A10 isoform X1.
   
 0.552
Col9a1
Collagen alpha-1(IX) chain isoform X1.
 
 
 0.513
Col2a1
Collagen alpha-1(II) chain isoform X1.
   
 0.501
Rbpjl
Recombining binding protein suppressor of hairless-like protein.
    
 0.477
Chad
Chondroadherin.
    
 0.451
Matn4
Matrilin 4.
   
 
0.446
Tbl3
U3 small nucleolar RNA-associated protein 13.
   
 
 0.443
Arid4b
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.436
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.