STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PtafrPlatelet-activating factor receptor. (341 aa)    
Predicted Functional Partners:
Gnaq
Guanine nucleotide-binding protein G(q) subunit alpha.
   
 0.864
Gna11
Guanine nucleotide-binding protein subunit alpha-11.
   
 0.795
Gna14
Guanine nucleotide-binding protein subunit alpha-14.
   
 0.788
Gna15
Guanine nucleotide-binding protein subunit alpha-15.
    
  0.788
Tlr4
Toll-like receptor 4.
   
 0.631
Pecam1
Platelet endothelial cell adhesion molecule isoform X1.
  
 0.610
Pla2g7
Platelet-activating factor acetylhydrolase.
   
  
 0.580
Gpr135
Probable G-protein coupled receptor 135.
     
 0.579
Lpcat2
Lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase.
      
 0.545
Icam1
Intercellular adhesion molecule 1.
      
 0.499
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.