STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Runx3Runt-related transcription factor 3 isoform X1. (425 aa)    
Predicted Functional Partners:
Cbfb
Core-binding factor subunit beta isoform X1.
    
 0.994
Tbx21
T-box transcription factor TBX21.
   
 0.969
Zfhx3
AT-binding transcription factor 1.
     
 0.932
Src
Proto-oncogene tyrosine-protein kinase Src isoform X1.
   
 
 0.922
Runx1
Runt-related transcription factor 1 isoform X1.
  
 
0.891
Ctnnb1
Catenin beta-1 isoform X1.
    
 0.823
Ets1
Protein C-ets-1 isoform X1.
   
 0.757
Mysm1
Histone H2A deubiquitinase MYSM1.
    
  0.757
Suv39h1
Histone-lysine N-methyltransferase SUV39H1 isoform X1.
   
 0.749
Gata3
Trans-acting T-cell-specific transcription factor GATA-3 isoform X1.
    
 0.745
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.