Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arl5c | Vwa5b1 | MGP_PahariEiJ_P0036321 | MGP_PahariEiJ_P0080472 | Putative ADP-ribosylation factor-like protein 5C. | Von Willebrand factor A domain-containing protein 5B1 isoform X1. | 0.622 |
Cul4a | Fen1 | MGP_PahariEiJ_P0046674 | MGP_PahariEiJ_P0021103 | Cullin-4A. | Flap endonuclease 1. | 0.590 |
Cul4a | Vwa5b1 | MGP_PahariEiJ_P0046674 | MGP_PahariEiJ_P0080472 | Cullin-4A. | Von Willebrand factor A domain-containing protein 5B1 isoform X1. | 0.470 |
Cul4a | Xpc | MGP_PahariEiJ_P0046674 | MGP_PahariEiJ_P0051228 | Cullin-4A. | Xeroderma pigmentosum group C-complementing protein. | 0.734 |
Fen1 | Cul4a | MGP_PahariEiJ_P0021103 | MGP_PahariEiJ_P0046674 | Flap endonuclease 1. | Cullin-4A. | 0.590 |
Fen1 | Parg | MGP_PahariEiJ_P0021103 | MGP_PahariEiJ_P0084259 | Flap endonuclease 1. | Poly(ADP-ribose) glycohydrolase isoform X1. | 0.614 |
Fen1 | Vwa5b1 | MGP_PahariEiJ_P0021103 | MGP_PahariEiJ_P0080472 | Flap endonuclease 1. | Von Willebrand factor A domain-containing protein 5B1 isoform X1. | 0.551 |
Fen1 | Xpc | MGP_PahariEiJ_P0021103 | MGP_PahariEiJ_P0051228 | Flap endonuclease 1. | Xeroderma pigmentosum group C-complementing protein. | 0.604 |
Fen1 | Xrcc5 | MGP_PahariEiJ_P0021103 | MGP_PahariEiJ_P0073511 | Flap endonuclease 1. | X-ray repair cross-complementing protein 5. | 0.709 |
Hpf1 | Parg | MGP_PahariEiJ_P0047389 | MGP_PahariEiJ_P0084259 | Histone PARylation factor 1. | Poly(ADP-ribose) glycohydrolase isoform X1. | 0.556 |
Hpf1 | Vwa5b1 | MGP_PahariEiJ_P0047389 | MGP_PahariEiJ_P0080472 | Histone PARylation factor 1. | Von Willebrand factor A domain-containing protein 5B1 isoform X1. | 0.488 |
Parg | Fen1 | MGP_PahariEiJ_P0084259 | MGP_PahariEiJ_P0021103 | Poly(ADP-ribose) glycohydrolase isoform X1. | Flap endonuclease 1. | 0.614 |
Parg | Hpf1 | MGP_PahariEiJ_P0084259 | MGP_PahariEiJ_P0047389 | Poly(ADP-ribose) glycohydrolase isoform X1. | Histone PARylation factor 1. | 0.556 |
Parg | Vwa5b1 | MGP_PahariEiJ_P0084259 | MGP_PahariEiJ_P0080472 | Poly(ADP-ribose) glycohydrolase isoform X1. | Von Willebrand factor A domain-containing protein 5B1 isoform X1. | 0.660 |
Tatdn2 | Vwa5b1 | MGP_PahariEiJ_P0051681 | MGP_PahariEiJ_P0080472 | Putative deoxyribonuclease TATDN2 isoform X1. | Von Willebrand factor A domain-containing protein 5B1 isoform X1. | 0.556 |
Tatdn2 | Xkr5 | MGP_PahariEiJ_P0051681 | MGP_PahariEiJ_P0046784 | Putative deoxyribonuclease TATDN2 isoform X1. | XK-related protein 5 isoform X1. | 0.447 |
Vstm5 | Vwa5b1 | MGP_PahariEiJ_P0022436 | MGP_PahariEiJ_P0080472 | V-set and transmembrane domain-containing protein 5. | Von Willebrand factor A domain-containing protein 5B1 isoform X1. | 0.622 |
Vwa5b1 | Arl5c | MGP_PahariEiJ_P0080472 | MGP_PahariEiJ_P0036321 | Von Willebrand factor A domain-containing protein 5B1 isoform X1. | Putative ADP-ribosylation factor-like protein 5C. | 0.622 |
Vwa5b1 | Cul4a | MGP_PahariEiJ_P0080472 | MGP_PahariEiJ_P0046674 | Von Willebrand factor A domain-containing protein 5B1 isoform X1. | Cullin-4A. | 0.470 |
Vwa5b1 | Fen1 | MGP_PahariEiJ_P0080472 | MGP_PahariEiJ_P0021103 | Von Willebrand factor A domain-containing protein 5B1 isoform X1. | Flap endonuclease 1. | 0.551 |
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