STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spata21Spermatogenesis-associated protein 21. (680 aa)    
Predicted Functional Partners:
Cask
Calcium/calmodulin-dependent serine protein kinase.
    
 0.674
Spata3
Spermatogenesis-associated protein 3 isoform X1.
    
 0.666
Spata24
Spermatogenesis-associated protein 24.
      
 0.574
Wdr90
WD repeat-containing protein 90 isoform X1.
   
 0.544
Clba1
Uncharacterized protein C14orf79 homolog.
     
 0.505
Dnajc4
DnaJ homolog subfamily C member 4 isoform X1.
      
 0.504
Csn3
Kappa-casein.
  
 
  0.504
Adam32
Disintegrin and metalloproteinase domain-containing protein 32.
      
 0.504
Gm4952
Glycine N-acyltransferase-like protein.
      
 0.503
MGP_PahariEiJ_P0069937
annotation not available
   
  
 0.486
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.