STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SkiSki oncogene isoform X1. (727 aa)    
Predicted Functional Partners:
Smad2
Mothers against decapentaplegic homolog 2 isoform X1.
   
 0.968
Smad3
Mothers against decapentaplegic homolog 3.
   
 0.917
Ncor1
Nuclear receptor co-repressor 1.
   
 0.814
Smad5
Mothers against decapentaplegic homolog 5 isoform X1.
   
 0.750
Smad1
Mothers against decapentaplegic homolog 1 isoform X1.
   
 0.748
Smad9
Mothers against decapentaplegic homolog 9.
   
 0.748
Mecp2
Methyl-CpG-binding protein 2 isoform X1.
    
 0.712
Ncor2
Nuclear receptor corepressor 2 isoform X1.
   
 0.677
Ints8
Integrator complex subunit 8.
   
 0.676
Rnf111
E3 ubiquitin-protein ligase Arkadia isoform X1.
   
 0.673
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.