Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atraid | Fndc4 | MGP_PahariEiJ_P0081779 | MGP_PahariEiJ_P0081658 | All-trans retinoic acid-induced differentiation factor isoform X1. | Fibronectin type III domain-containing protein 4. | 0.478 |
Ccdc121 | Fndc4 | MGP_PahariEiJ_P0076920 | MGP_PahariEiJ_P0081658 | Coiled-coil domain-containing protein 121-like. | Fibronectin type III domain-containing protein 4. | 0.558 |
Ccdc121 | Gpn1 | MGP_PahariEiJ_P0076920 | MGP_PahariEiJ_P0081641 | Coiled-coil domain-containing protein 121-like. | GPN-loop GTPase 1. | 0.501 |
Ccdc121 | Krtcap3 | MGP_PahariEiJ_P0076920 | MGP_PahariEiJ_P0081680 | Coiled-coil domain-containing protein 121-like. | Keratinocyte-associated protein 3. | 0.574 |
Ccdc121 | MGP_PahariEiJ_P0081725 | MGP_PahariEiJ_P0076920 | MGP_PahariEiJ_P0081725 | Coiled-coil domain-containing protein 121-like. | annotation not available | 0.418 |
Ccdc121 | Nrbp1 | MGP_PahariEiJ_P0076920 | MGP_PahariEiJ_P0081687 | Coiled-coil domain-containing protein 121-like. | Nuclear receptor-binding protein. | 0.558 |
Ccdc121 | Slc4a1ap | MGP_PahariEiJ_P0076920 | MGP_PahariEiJ_P0081628 | Coiled-coil domain-containing protein 121-like. | Kanadaptin isoform X1. | 0.561 |
Ccdc121 | Supt7l | MGP_PahariEiJ_P0076920 | MGP_PahariEiJ_P0081638 | Coiled-coil domain-containing protein 121-like. | STAGA complex 65 subunit gamma. | 0.573 |
Ccdc121 | Zfp512 | MGP_PahariEiJ_P0076920 | MGP_PahariEiJ_P0081648 | Coiled-coil domain-containing protein 121-like. | Zinc finger protein 512 isoform X1. | 0.574 |
Fndc4 | Atraid | MGP_PahariEiJ_P0081658 | MGP_PahariEiJ_P0081779 | Fibronectin type III domain-containing protein 4. | All-trans retinoic acid-induced differentiation factor isoform X1. | 0.478 |
Fndc4 | Ccdc121 | MGP_PahariEiJ_P0081658 | MGP_PahariEiJ_P0076920 | Fibronectin type III domain-containing protein 4. | Coiled-coil domain-containing protein 121-like. | 0.558 |
Fndc4 | Gpn1 | MGP_PahariEiJ_P0081658 | MGP_PahariEiJ_P0081641 | Fibronectin type III domain-containing protein 4. | GPN-loop GTPase 1. | 0.476 |
Fndc4 | Krtcap3 | MGP_PahariEiJ_P0081658 | MGP_PahariEiJ_P0081680 | Fibronectin type III domain-containing protein 4. | Keratinocyte-associated protein 3. | 0.558 |
Fndc4 | MGP_PahariEiJ_P0081725 | MGP_PahariEiJ_P0081658 | MGP_PahariEiJ_P0081725 | Fibronectin type III domain-containing protein 4. | annotation not available | 0.504 |
Fndc4 | Nrbp1 | MGP_PahariEiJ_P0081658 | MGP_PahariEiJ_P0081687 | Fibronectin type III domain-containing protein 4. | Nuclear receptor-binding protein. | 0.478 |
Fndc4 | Slc35f6 | MGP_PahariEiJ_P0081658 | MGP_PahariEiJ_P0081851 | Fibronectin type III domain-containing protein 4. | Solute carrier family 35 member F6. | 0.495 |
Fndc4 | Slc4a1ap | MGP_PahariEiJ_P0081658 | MGP_PahariEiJ_P0081628 | Fibronectin type III domain-containing protein 4. | Kanadaptin isoform X1. | 0.504 |
Fndc4 | Supt7l | MGP_PahariEiJ_P0081658 | MGP_PahariEiJ_P0081638 | Fibronectin type III domain-containing protein 4. | STAGA complex 65 subunit gamma. | 0.505 |
Fndc4 | Zfp512 | MGP_PahariEiJ_P0081658 | MGP_PahariEiJ_P0081648 | Fibronectin type III domain-containing protein 4. | Zinc finger protein 512 isoform X1. | 0.545 |
Gpn1 | Ccdc121 | MGP_PahariEiJ_P0081641 | MGP_PahariEiJ_P0076920 | GPN-loop GTPase 1. | Coiled-coil domain-containing protein 121-like. | 0.501 |
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