STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttc7bTetratricopeptide repeat protein 7B isoform X1. (843 aa)    
Predicted Functional Partners:
Fam126a
Hyccin isoform X1.
    
 
 0.917
Efr3b
Protein EFR3 homolog B isoform X1.
   
 
 0.828
MGP_PahariEiJ_P0028021
annotation not available
    
 
 0.827
Efr3a
Protein EFR3 homolog A isoform X1.
   
 
 0.640
Fam126b
Protein FAM126B isoform X1.
    
 
 0.596
Tmem150a
Transmembrane protein 150A.
      
 0.558
Tmed6
Transmembrane emp24 domain-containing protein 6.
      
 0.482
Large2
LARGE xylosyl- and glucuronyltransferase 2 isoform X1.
      
 0.481
Pcmt1
Protein-L-isoaspartate(D-aspartate) O-methyltransferase isoform X1.
      
 0.474
Copz2
Coatomer subunit zeta-2 isoform X1.
      
 0.471
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.