STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc24a4Solute carrier family 24 (sodium/potassium/calcium exchanger), member 4. (606 aa)    
Predicted Functional Partners:
Smtnl2
Smoothelin-like protein 2.
      
 0.643
Nme8
Thioredoxin domain-containing protein 3.
     
 0.632
Abca7
ATP-binding cassette sub-family A member 7 isoform X1.
  
 
 0.603
Get4
Golgi to ER traffic protein 4 homolog isoform X1.
    
   0.587
Fam20a
Pseudokinase FAM20A.
   
 
 0.586
Rin3
Ras and Rab interactor 2/3.
 
    
 0.586
Wdr72
WD repeat-containing protein 72.
      
 0.574
Fam83h
Protein FAM83H.
      
 0.574
Klk4
Kallikrein 4.
      
 0.569
Clint1
Clathrin interactor 1 isoform X1.
      
 0.565
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.