STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdca4Cell division cycle-associated protein 4. (237 aa)    
Predicted Functional Partners:
Cdca8
Borealin isoform X1.
   
 
 0.558
Cdca5
Sororin.
   
  
 0.545
Ppp2r2c
Serine/threonine-protein phosphatase 2A regulatory subunit B.
    
   0.535
Ppp2r2a
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1.
    
   0.510
Nos1ap
Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform X1.
      
 0.499
Gtf2a2
Transcription initiation factor TFIIA small subunit.
      
 0.495
Sertad4
SERTA domain-containing protein 4.
      
 0.478
Haus4
HAUS augmin-like complex subunit 4 isoform X1.
      
 0.478
Cdca7
Cell division cycle-associated protein 7 isoform X1.
   
 
 0.461
Sertad3
SERTA domain-containing protein 3.
   
  
 0.438
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.