STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rnf31E3 ubiquitin-protein ligase RNF31. (1066 aa)    
Predicted Functional Partners:
Sharpin
Shank-associated RH domain-interacting protein.
    
 0.999
Rbck1
RanBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1.
   
 0.999
Birc3
Baculoviral IAP repeat-containing protein 2/3.
    
 0.990
Otulin
Ubiquitin thioesterase otulin.
    
 0.988
Traf2
TNF receptor-associated factor 2 isoform X1.
    
 0.987
Ripk1
Receptor-interacting serine/threonine-protein kinase 1 isoform X1.
    
 0.986
Ikbkg
Inhibitor of nuclear factor kappa-B kinase subunit gamma.
    
 0.985
Traf5
TNF receptor-associated factor 5 isoform X1.
    
 0.983
Spata2
Spermatogenesis-associated protein 2 isoform X1.
     
 0.973
Xiap
E3 ubiquitin-protein ligase XIAP isoform X1.
    
 0.964
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.