STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tnfrsf19Tumor necrosis factor receptor superfamily member 19. (416 aa)    
Predicted Functional Partners:
Lingo1
Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein.
      
 0.896
Rtn4r
Reticulon-4 receptor.
      
 0.837
Omg
Oligodendrocyte myelin glycoprotein.
      
 0.729
Rtn4
Reticulon-4 isoform X1.
      
 0.666
Rtn4rl2
Reticulon-4 receptor-like 2.
      
 0.636
Lgr5
Leucine-rich repeat-containing G protein-coupled receptor 5.
    
 
 0.575
Tnfrsf21
Tumor necrosis factor receptor superfamily member 21.
      
 0.561
Tnf
Tumor necrosis factor superfamily, member 2.
      
 0.422
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.