STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SacsSacsin isoform X1. (4582 aa)    
Predicted Functional Partners:
Incenp
Inner centromere protein isoform X1.
   
 0.760
Diablo
Diablo homolog, mitochondrial isoform X1.
    
 0.723
Apaf1
Apoptotic protease-activating factor 1 isoform X1.
   
 0.662
Aurkb
Aurora kinase B isoform X1.
   
 0.640
Aurkc
Aurora kinase C isoform X1.
   
 0.640
Aurka
LOW QUALITY PROTEIN: aurora kinase A.
   
 0.640
Cdca8
Borealin isoform X1.
   
 0.634
Atp5b
F-type H+-transporting ATPase subunit beta.
   
 0.634
Kdm6b
Lysine-specific demethylase 6B.
   
 0.581
Kdm6a
Lysine-specific demethylase 6A isoform X1.
   
 0.581
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.