STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EbplEmopamil-binding protein-like. (206 aa)    
Predicted Functional Partners:
Atp6v1f
V-type H+-transporting ATPase subunit F.
    
 
 0.652
Atp6v0b
V-type H+-transporting ATPase 21kDa proteolipid subunit.
    
 
 0.618
Atp6v0d1
V-type H+-transporting ATPase subunit d.
    
 
 0.604
Atp6v0d2
V-type H+-transporting ATPase subunit d.
    
 
 0.604
Plpp5
Diacylglycerol diphosphate phosphatase / phosphatidate phosphatase.
   
 0.557
Sc5d
Delta7-sterol 5-desaturase.
   
 
 0.533
Dhcr24
Delta(24)-sterol reductase.
   
 0.510
Tm6sf1
Transmembrane 6 superfamily member 1 isoform X3.
      
 0.504
Tcirg1
V-type H+-transporting ATPase subunit a.
    
 
 0.490
Atp6v0a1
V-type proton ATPase 116 kDa subunit a isoform X1.
    
 
 0.490
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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