STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gata4Transcription factor GATA-4 isoform X1. (442 aa)    
Predicted Functional Partners:
Zfpm2
Zinc finger protein ZFPM2.
    
 0.987
Nkx2-5
Homeobox protein Nkx-2.5.
   
 0.983
Nfatc4
Nuclear factor of activated T-cells, cytoplasmic 4 isoform X1.
     
 0.966
Sox9
Transcription factor SOX9 (SOX group E).
    
 0.953
Srf
Serum response factor.
    
 0.951
Nfatc1
Nuclear factor of activated T-cells, cytoplasmic 1 isoform X1.
   
 0.949
Sqstm1
Sequestosome-1 isoform X1.
    
 0.939
Rhoa
Transforming protein RhoA isoform X1.
   
 0.919
Nfatc2
Nuclear factor of activated T-cells, cytoplasmic 2 isoform X1.
   
 0.919
Nr5a1
Steroidogenic factor 1 isoform X1.
    
 0.903
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.