Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bloc1s1 | Scara3 | MGP_PahariEiJ_P0087455 | MGP_PahariEiJ_P0085259 | Biogenesis of lysosome-related organelles complex 1 subunit 1. | Scavenger receptor class A member 3. | 0.520 |
Cpsf3 | Scara3 | MGP_PahariEiJ_P0082100 | MGP_PahariEiJ_P0085259 | Cleavage and polyadenylation specificity factor subunit 3. | Scavenger receptor class A member 3. | 0.472 |
Scara3 | Bloc1s1 | MGP_PahariEiJ_P0085259 | MGP_PahariEiJ_P0087455 | Scavenger receptor class A member 3. | Biogenesis of lysosome-related organelles complex 1 subunit 1. | 0.520 |
Scara3 | Cpsf3 | MGP_PahariEiJ_P0085259 | MGP_PahariEiJ_P0082100 | Scavenger receptor class A member 3. | Cleavage and polyadenylation specificity factor subunit 3. | 0.472 |
Scara3 | Scara5 | MGP_PahariEiJ_P0085259 | MGP_PahariEiJ_P0085250 | Scavenger receptor class A member 3. | Scavenger receptor class A member 5 isoform X1. | 0.418 |
Scara5 | Scara3 | MGP_PahariEiJ_P0085250 | MGP_PahariEiJ_P0085259 | Scavenger receptor class A member 5 isoform X1. | Scavenger receptor class A member 3. | 0.418 |