STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Itm2bIntegral membrane protein 2B. (266 aa)    
Predicted Functional Partners:
App
Amyloid beta precursor protein.
   
 0.711
Sppl2b
Signal peptide peptidase-like 2B isoform X1.
      
 0.557
MGP_PahariEiJ_P0065373
annotation not available
      
 0.538
Actg2
Actin, gamma-enteric smooth muscle isoform X1.
   
 
 0.445
Atp1b2
Sodium/potassium-transporting ATPase subunit beta-2.
   
 
 0.444
Hnrnpd
Heterogeneous nuclear ribonucleoprotein D0 isoform X1.
   
 
 0.437
Cst3
Cystatin-C.
   
 
 0.436
Rcbtb2
RCC1 and BTB domain-containing protein 2 isoform X1.
   
  
 0.426
Jagn1
Protein jagunal homolog 1 isoform X1.
      
 0.420
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.