Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cenpa | Pcdh20 | MGP_PahariEiJ_P0081845 | MGP_PahariEiJ_P0085590 | Histone H3-like centromeric protein A. | Protocadherin delta 1. | 0.491 |
Gm37013 | Pcdh20 | MGP_PahariEiJ_P0039044 | MGP_PahariEiJ_P0085590 | Predicted gene, 37013. | Protocadherin delta 1. | 0.616 |
Lix1 | Pcdh20 | MGP_PahariEiJ_P0055130 | MGP_PahariEiJ_P0085590 | Protein limb expression 1 homolog. | Protocadherin delta 1. | 0.412 |
Lix1l | Pcdh20 | MGP_PahariEiJ_P0070293 | MGP_PahariEiJ_P0085590 | LIX1-like protein. | Protocadherin delta 1. | 0.412 |
Pcdh20 | Cenpa | MGP_PahariEiJ_P0085590 | MGP_PahariEiJ_P0081845 | Protocadherin delta 1. | Histone H3-like centromeric protein A. | 0.491 |
Pcdh20 | Gm37013 | MGP_PahariEiJ_P0085590 | MGP_PahariEiJ_P0039044 | Protocadherin delta 1. | Predicted gene, 37013. | 0.616 |
Pcdh20 | Lix1 | MGP_PahariEiJ_P0085590 | MGP_PahariEiJ_P0055130 | Protocadherin delta 1. | Protein limb expression 1 homolog. | 0.412 |
Pcdh20 | Lix1l | MGP_PahariEiJ_P0085590 | MGP_PahariEiJ_P0070293 | Protocadherin delta 1. | LIX1-like protein. | 0.412 |