STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PccaPropionyl-CoA carboxylase alpha chain, mitochondrial. (723 aa)    
Predicted Functional Partners:
Pccb
Propionyl-CoA carboxylase beta chain, mitochondrial isoform X1.
 
 0.999
Mccc2
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
 
 0.971
Mcee
Methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
  
 
 0.968
Dbt
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase).
  
 0.964
Aldh6a1
Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase.
   
 
 0.953
Echdc1
Ethylmalonyl-CoA/methylmalonyl-CoA decarboxylase.
  
 0.945
Acads
Short-chain specific acyl-CoA dehydrogenase, mitochondrial.
  
 0.945
Acox3
Peroxisomal acyl-coenzyme A oxidase 3.
  
 0.943
Acox1
Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.
  
 0.943
Acss3
Acyl-CoA synthetase short-chain family member 3, mitochondrial isoform X1.
  
 0.940
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.