Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rfpl4 | Rfpl4b | MGP_PahariEiJ_P0045686 | MGP_PahariEiJ_P0085819 | Ret finger protein-like 4A. | LOW QUALITY PROTEIN: ret finger protein-like 4B. | 0.519 |
Rfpl4b | Rfpl4 | MGP_PahariEiJ_P0085819 | MGP_PahariEiJ_P0045686 | LOW QUALITY PROTEIN: ret finger protein-like 4B. | Ret finger protein-like 4A. | 0.519 |
Rfpl4b | Rps27a | MGP_PahariEiJ_P0085819 | MGP_PahariEiJ_P0029960 | LOW QUALITY PROTEIN: ret finger protein-like 4B. | Ubiquitin-small subunit ribosomal protein S27Ae. | 0.429 |
Rfpl4b | Sfmbt1 | MGP_PahariEiJ_P0085819 | MGP_PahariEiJ_P0084084 | LOW QUALITY PROTEIN: ret finger protein-like 4B. | Scm-like with four MBT domains protein 1. | 0.437 |
Rfpl4b | Smc2 | MGP_PahariEiJ_P0085819 | MGP_PahariEiJ_P0077513 | LOW QUALITY PROTEIN: ret finger protein-like 4B. | Structural maintenance of chromosomes protein 2. | 0.414 |
Rfpl4b | Tubgcp5 | MGP_PahariEiJ_P0085819 | MGP_PahariEiJ_P0016684 | LOW QUALITY PROTEIN: ret finger protein-like 4B. | Gamma-tubulin complex component 5. | 0.461 |
Rps27a | Rfpl4b | MGP_PahariEiJ_P0029960 | MGP_PahariEiJ_P0085819 | Ubiquitin-small subunit ribosomal protein S27Ae. | LOW QUALITY PROTEIN: ret finger protein-like 4B. | 0.429 |
Sfmbt1 | Rfpl4b | MGP_PahariEiJ_P0084084 | MGP_PahariEiJ_P0085819 | Scm-like with four MBT domains protein 1. | LOW QUALITY PROTEIN: ret finger protein-like 4B. | 0.437 |
Smc2 | Rfpl4b | MGP_PahariEiJ_P0077513 | MGP_PahariEiJ_P0085819 | Structural maintenance of chromosomes protein 2. | LOW QUALITY PROTEIN: ret finger protein-like 4B. | 0.414 |
Tubgcp5 | Rfpl4b | MGP_PahariEiJ_P0016684 | MGP_PahariEiJ_P0085819 | Gamma-tubulin complex component 5. | LOW QUALITY PROTEIN: ret finger protein-like 4B. | 0.461 |