STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GopcGolgi-associated PDZ and coiled-coil motif-containing protein isoform X1. (463 aa)    
Predicted Functional Partners:
Rhoq
Rho-related GTP-binding protein RhoQ.
    
 0.859
Cftr
Cystic fibrosis transmembrane conductance regulator.
   
 0.790
Golga3
Golgin subfamily A member 3 isoform X1.
   
 0.760
Pick1
PRKCA-binding protein.
   
 0.757
Cytl1
Cytokine-like protein 1.
      
 0.755
Cd46
Membrane cofactor protein.
    
 
 0.734
Ttc26
Intraflagellar transport protein 56 isoform X1.
   
 0.636
Ros1
Proto-oncogene tyrosine-protein kinase ROS.
    
 0.611
Becn1
Beclin-1 isoform X1.
    
 
 0.594
Rhoj
Rho-related GTP-binding protein RhoJ.
    
 0.574
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
Server load: low (22%) [HD]