Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
4933400A11Rik | Capza2 | MGP_PahariEiJ_P0091023 | MGP_PahariEiJ_P0048820 | RIKEN cDNA 4933400A11 gene. | Capping protein (actin filament) muscle Z-line, alpha. | 0.732 |
4933400A11Rik | Capza3 | MGP_PahariEiJ_P0091023 | MGP_PahariEiJ_P0053012 | RIKEN cDNA 4933400A11 gene. | Capping protein (actin filament) muscle Z-line, alpha. | 0.749 |
4933400A11Rik | S100b | MGP_PahariEiJ_P0091023 | MGP_PahariEiJ_P0086650 | RIKEN cDNA 4933400A11 gene. | Protein S100-B. | 0.774 |
Capza1 | Capza2 | MGP_PahariEiJ_P0070667 | MGP_PahariEiJ_P0048820 | Capping protein (actin filament) muscle Z-line, alpha. | Capping protein (actin filament) muscle Z-line, alpha. | 0.999 |
Capza1 | Capza3 | MGP_PahariEiJ_P0070667 | MGP_PahariEiJ_P0053012 | Capping protein (actin filament) muscle Z-line, alpha. | Capping protein (actin filament) muscle Z-line, alpha. | 0.972 |
Capza1 | S100b | MGP_PahariEiJ_P0070667 | MGP_PahariEiJ_P0086650 | Capping protein (actin filament) muscle Z-line, alpha. | Protein S100-B. | 0.774 |
Capza2 | 4933400A11Rik | MGP_PahariEiJ_P0048820 | MGP_PahariEiJ_P0091023 | Capping protein (actin filament) muscle Z-line, alpha. | RIKEN cDNA 4933400A11 gene. | 0.732 |
Capza2 | Capza1 | MGP_PahariEiJ_P0048820 | MGP_PahariEiJ_P0070667 | Capping protein (actin filament) muscle Z-line, alpha. | Capping protein (actin filament) muscle Z-line, alpha. | 0.999 |
Capza2 | Capza3 | MGP_PahariEiJ_P0048820 | MGP_PahariEiJ_P0053012 | Capping protein (actin filament) muscle Z-line, alpha. | Capping protein (actin filament) muscle Z-line, alpha. | 0.933 |
Capza2 | S100b | MGP_PahariEiJ_P0048820 | MGP_PahariEiJ_P0086650 | Capping protein (actin filament) muscle Z-line, alpha. | Protein S100-B. | 0.774 |
Capza3 | 4933400A11Rik | MGP_PahariEiJ_P0053012 | MGP_PahariEiJ_P0091023 | Capping protein (actin filament) muscle Z-line, alpha. | RIKEN cDNA 4933400A11 gene. | 0.749 |
Capza3 | Capza1 | MGP_PahariEiJ_P0053012 | MGP_PahariEiJ_P0070667 | Capping protein (actin filament) muscle Z-line, alpha. | Capping protein (actin filament) muscle Z-line, alpha. | 0.972 |
Capza3 | Capza2 | MGP_PahariEiJ_P0053012 | MGP_PahariEiJ_P0048820 | Capping protein (actin filament) muscle Z-line, alpha. | Capping protein (actin filament) muscle Z-line, alpha. | 0.933 |
Capza3 | S100b | MGP_PahariEiJ_P0053012 | MGP_PahariEiJ_P0086650 | Capping protein (actin filament) muscle Z-line, alpha. | Protein S100-B. | 0.774 |
S100b | 4933400A11Rik | MGP_PahariEiJ_P0086650 | MGP_PahariEiJ_P0091023 | Protein S100-B. | RIKEN cDNA 4933400A11 gene. | 0.774 |
S100b | Capza1 | MGP_PahariEiJ_P0086650 | MGP_PahariEiJ_P0070667 | Protein S100-B. | Capping protein (actin filament) muscle Z-line, alpha. | 0.774 |
S100b | Capza2 | MGP_PahariEiJ_P0086650 | MGP_PahariEiJ_P0048820 | Protein S100-B. | Capping protein (actin filament) muscle Z-line, alpha. | 0.774 |
S100b | Capza3 | MGP_PahariEiJ_P0086650 | MGP_PahariEiJ_P0053012 | Protein S100-B. | Capping protein (actin filament) muscle Z-line, alpha. | 0.774 |
S100b | Sdf4 | MGP_PahariEiJ_P0086650 | MGP_PahariEiJ_P0081528 | Protein S100-B. | 45 kDa calcium-binding protein. | 0.436 |
S100b | Stk38 | MGP_PahariEiJ_P0086650 | MGP_PahariEiJ_P0056002 | Protein S100-B. | Serine/threonine-protein kinase 38. | 0.610 |
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