STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_PahariEiJ_P0086755Keratin-associated protein 10-9-like isoform X1. (268 aa)    
Predicted Functional Partners:
Nipbl
Cohesin loading factor subunit SCC2.
   
 0.569
Myl1
Myosin light chain 1/3, skeletal muscle isoform isoform X1.
   
 0.467
Skp1a
S-phase kinase-associated protein 1.
    
 0.456
Mysm1
Histone H2A deubiquitinase MYSM1.
    
 0.428
Arid4b
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.411
Arid4a
AT-rich interactive domain-containing protein 4A.
    
 0.411
Myoz1
Myozenin-1.
   
  
 0.410
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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