Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arid4a | Arid4b | MGP_PahariEiJ_P0082580 | MGP_PahariEiJ_P0040311 | AT-rich interactive domain-containing protein 4A. | AT-rich interactive domain-containing protein 4B isoform X1. | 0.564 |
Arid4a | MGP_PahariEiJ_P0086755 | MGP_PahariEiJ_P0082580 | MGP_PahariEiJ_P0086755 | AT-rich interactive domain-containing protein 4A. | Keratin-associated protein 10-9-like isoform X1. | 0.411 |
Arid4a | Mysm1 | MGP_PahariEiJ_P0082580 | MGP_PahariEiJ_P0078102 | AT-rich interactive domain-containing protein 4A. | Histone H2A deubiquitinase MYSM1. | 0.763 |
Arid4b | Arid4a | MGP_PahariEiJ_P0040311 | MGP_PahariEiJ_P0082580 | AT-rich interactive domain-containing protein 4B isoform X1. | AT-rich interactive domain-containing protein 4A. | 0.564 |
Arid4b | MGP_PahariEiJ_P0086755 | MGP_PahariEiJ_P0040311 | MGP_PahariEiJ_P0086755 | AT-rich interactive domain-containing protein 4B isoform X1. | Keratin-associated protein 10-9-like isoform X1. | 0.411 |
Arid4b | Mysm1 | MGP_PahariEiJ_P0040311 | MGP_PahariEiJ_P0078102 | AT-rich interactive domain-containing protein 4B isoform X1. | Histone H2A deubiquitinase MYSM1. | 0.770 |
Arid4b | Nipbl | MGP_PahariEiJ_P0040311 | MGP_PahariEiJ_P0027318 | AT-rich interactive domain-containing protein 4B isoform X1. | Cohesin loading factor subunit SCC2. | 0.548 |
MGP_PahariEiJ_P0086755 | Arid4a | MGP_PahariEiJ_P0086755 | MGP_PahariEiJ_P0082580 | Keratin-associated protein 10-9-like isoform X1. | AT-rich interactive domain-containing protein 4A. | 0.411 |
MGP_PahariEiJ_P0086755 | Arid4b | MGP_PahariEiJ_P0086755 | MGP_PahariEiJ_P0040311 | Keratin-associated protein 10-9-like isoform X1. | AT-rich interactive domain-containing protein 4B isoform X1. | 0.411 |
MGP_PahariEiJ_P0086755 | Myl1 | MGP_PahariEiJ_P0086755 | MGP_PahariEiJ_P0073436 | Keratin-associated protein 10-9-like isoform X1. | Myosin light chain 1/3, skeletal muscle isoform isoform X1. | 0.467 |
MGP_PahariEiJ_P0086755 | Myoz1 | MGP_PahariEiJ_P0086755 | MGP_PahariEiJ_P0083853 | Keratin-associated protein 10-9-like isoform X1. | Myozenin-1. | 0.410 |
MGP_PahariEiJ_P0086755 | Mysm1 | MGP_PahariEiJ_P0086755 | MGP_PahariEiJ_P0078102 | Keratin-associated protein 10-9-like isoform X1. | Histone H2A deubiquitinase MYSM1. | 0.428 |
MGP_PahariEiJ_P0086755 | Nipbl | MGP_PahariEiJ_P0086755 | MGP_PahariEiJ_P0027318 | Keratin-associated protein 10-9-like isoform X1. | Cohesin loading factor subunit SCC2. | 0.569 |
MGP_PahariEiJ_P0086755 | Skp1a | MGP_PahariEiJ_P0086755 | MGP_PahariEiJ_P0033356 | Keratin-associated protein 10-9-like isoform X1. | S-phase kinase-associated protein 1. | 0.456 |
Myl1 | MGP_PahariEiJ_P0086755 | MGP_PahariEiJ_P0073436 | MGP_PahariEiJ_P0086755 | Myosin light chain 1/3, skeletal muscle isoform isoform X1. | Keratin-associated protein 10-9-like isoform X1. | 0.467 |
Myl1 | Myoz1 | MGP_PahariEiJ_P0073436 | MGP_PahariEiJ_P0083853 | Myosin light chain 1/3, skeletal muscle isoform isoform X1. | Myozenin-1. | 0.598 |
Myoz1 | MGP_PahariEiJ_P0086755 | MGP_PahariEiJ_P0083853 | MGP_PahariEiJ_P0086755 | Myozenin-1. | Keratin-associated protein 10-9-like isoform X1. | 0.410 |
Myoz1 | Myl1 | MGP_PahariEiJ_P0083853 | MGP_PahariEiJ_P0073436 | Myozenin-1. | Myosin light chain 1/3, skeletal muscle isoform isoform X1. | 0.598 |
Mysm1 | Arid4a | MGP_PahariEiJ_P0078102 | MGP_PahariEiJ_P0082580 | Histone H2A deubiquitinase MYSM1. | AT-rich interactive domain-containing protein 4A. | 0.763 |
Mysm1 | Arid4b | MGP_PahariEiJ_P0078102 | MGP_PahariEiJ_P0040311 | Histone H2A deubiquitinase MYSM1. | AT-rich interactive domain-containing protein 4B isoform X1. | 0.770 |
page 1 of 2