Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Egfr | Erbb2 | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0036375 | Epidermal growth factor receptor isoform X1. | Receptor tyrosine-protein kinase erbB-2. | 0.999 |
Egfr | Erbb3 | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0087493 | Epidermal growth factor receptor isoform X1. | Receptor tyrosine-protein kinase erbB-3. | 0.994 |
Egfr | Erbb4 | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0073450 | Epidermal growth factor receptor isoform X1. | Receptor tyrosine-protein kinase erbB-4 isoform X1. | 0.917 |
Egfr | Gab1 | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0053415 | Epidermal growth factor receptor isoform X1. | GRB2-associated-binding protein 1 isoform X1. | 0.995 |
Egfr | Grb2 | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0037712 | Epidermal growth factor receptor isoform X1. | Growth factor receptor-bound protein 2 isoform X1. | 0.999 |
Egfr | Igf1r | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0016947 | Epidermal growth factor receptor isoform X1. | Insulin-like growth factor 1 receptor isoform X1. | 0.682 |
Egfr | Insr | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0046473 | Epidermal growth factor receptor isoform X1. | Insulin receptor isoform X1. | 0.584 |
Egfr | Kdr | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0031882 | Epidermal growth factor receptor isoform X1. | Vascular endothelial growth factor receptor 2. | 0.738 |
Egfr | Met | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0048812 | Epidermal growth factor receptor isoform X1. | Proto-oncogene tyrosine-protein kinase Met. | 0.937 |
Egfr | Shc2 | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0086863 | Epidermal growth factor receptor isoform X1. | SHC-transforming protein 2. | 0.958 |
Erbb2 | Egfr | MGP_PahariEiJ_P0036375 | MGP_PahariEiJ_P0030207 | Receptor tyrosine-protein kinase erbB-2. | Epidermal growth factor receptor isoform X1. | 0.999 |
Erbb2 | Erbb3 | MGP_PahariEiJ_P0036375 | MGP_PahariEiJ_P0087493 | Receptor tyrosine-protein kinase erbB-2. | Receptor tyrosine-protein kinase erbB-3. | 0.999 |
Erbb2 | Erbb4 | MGP_PahariEiJ_P0036375 | MGP_PahariEiJ_P0073450 | Receptor tyrosine-protein kinase erbB-2. | Receptor tyrosine-protein kinase erbB-4 isoform X1. | 0.996 |
Erbb2 | Gab1 | MGP_PahariEiJ_P0036375 | MGP_PahariEiJ_P0053415 | Receptor tyrosine-protein kinase erbB-2. | GRB2-associated-binding protein 1 isoform X1. | 0.965 |
Erbb2 | Grb2 | MGP_PahariEiJ_P0036375 | MGP_PahariEiJ_P0037712 | Receptor tyrosine-protein kinase erbB-2. | Growth factor receptor-bound protein 2 isoform X1. | 0.996 |
Erbb2 | Igf1r | MGP_PahariEiJ_P0036375 | MGP_PahariEiJ_P0016947 | Receptor tyrosine-protein kinase erbB-2. | Insulin-like growth factor 1 receptor isoform X1. | 0.832 |
Erbb2 | Insr | MGP_PahariEiJ_P0036375 | MGP_PahariEiJ_P0046473 | Receptor tyrosine-protein kinase erbB-2. | Insulin receptor isoform X1. | 0.457 |
Erbb2 | Kdr | MGP_PahariEiJ_P0036375 | MGP_PahariEiJ_P0031882 | Receptor tyrosine-protein kinase erbB-2. | Vascular endothelial growth factor receptor 2. | 0.597 |
Erbb2 | Met | MGP_PahariEiJ_P0036375 | MGP_PahariEiJ_P0048812 | Receptor tyrosine-protein kinase erbB-2. | Proto-oncogene tyrosine-protein kinase Met. | 0.831 |
Erbb2 | Shc2 | MGP_PahariEiJ_P0036375 | MGP_PahariEiJ_P0086863 | Receptor tyrosine-protein kinase erbB-2. | SHC-transforming protein 2. | 0.958 |
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