STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pwwp3aPWWP domain-containing DNA repair factor 3. (689 aa)    
Predicted Functional Partners:
Ndufs8
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
  
 0.938
Ndufv1
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial isoform X1.
  
 0.938
Ndufv2
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial.
  
 0.938
Ndufs3
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial.
  
 0.938
Ndufs1
NADH:ubiquinone oxidoreductase core subunit S1.
  
 0.938
Ndufs2
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial isoform X1.
  
 0.938
Ndufa8
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.
   
 0.914
MGP_PahariEiJ_P0052536
annotation not available
   
 0.912
Cyc1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
   
 0.907
Ndufb9
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 isoform X1.
   
 0.901
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.