STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S1pr4Sphingosine 1-phosphate receptor 4. (386 aa)    
Predicted Functional Partners:
Gna12
Guanine nucleotide-binding protein subunit alpha-12 isoform X1.
    
 0.977
Gnai2
Guanine nucleotide-binding protein G(i) subunit alpha-2 isoform X1.
    
 0.944
Gnai1
Guanine nucleotide-binding protein G(i) subunit alpha-1 isoform X1.
    
 0.944
Gna13
Guanine nucleotide-binding protein subunit alpha-13 isoform X1.
    
 0.928
S1pr1
Sphingosine 1-phosphate receptor 1.
     
0.926
Sphk2
Sphingosine kinase 2.
      
 0.732
Gnaq
Guanine nucleotide-binding protein G(q) subunit alpha.
    
 0.586
Sphk1
Sphingosine kinase 1 isoform X1.
      
 0.577
Gnas
Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas isoform X1.
    
 0.571
Gnao1
Guanine nucleotide-binding protein G(o) subunit alpha isoform X1.
    
 0.553
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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